publications

2026

1. Mol. Cell

   Engineering intrinsically disordered regions for guiding genome navigation

   J Liu, DK Kumar, B Hurieva, and 2 more authors

   Molecular Cell, 2026

   Bib

   @article{liu2026_engineering,
     title = {Engineering intrinsically disordered regions for guiding genome navigation},
     author = {Liu, J and Kumar, DK and Hurieva, B and Jonas, F and Barkai, N},
     journal = {Molecular Cell},
     year = {2026},
   }

2024

1. NAR

   Disordered sequences of transcription factors regulate genomic binding by integrating diverse sequence grammars and interaction types

   B Hurieva, DK Kumar, R Morag, and 4 more authors

   Nucleic Acids Research, 2024

   Bib

   @article{hurieva2024_disordered,
     title = {Disordered sequences of transcription factors regulate genomic binding by integrating diverse sequence grammars and interaction types},
     author = {Hurieva, B and Kumar, DK and Morag, R and Lupo, O and Carmi, M and Barkai, N and Jonas, F},
     journal = {Nucleic Acids Research},
     volume = {52},
     number = {15},
     pages = {8763--8777},
     year = {2024},
   }

2. ChIP Methods

   ChEC-Seq: A Comprehensive Guide for Scalable and Cost-Efficient Genome-Wide Profiling in Saccharomyces cerevisiae

   T Gera, DK Kumar, G Yaakov, and 2 more authors

   2024

   Bib

   @article{gera2024_checs,
     title = {ChEC-Seq: A Comprehensive Guide for Scalable and Cost-Efficient Genome-Wide Profiling in Saccharomyces cerevisiae},
     author = {Gera, T and Kumar, DK and Yaakov, G and Barkai, N and Jonas, F},
     booktitle = {Chromatin Immunoprecipitation: Methods and Protocols},
     pages = {263--283},
     year = {2024},
   }

2023

1. Mol. Cell

   Complementary strategies for directing in vivo transcription factor binding through DNA binding domains and intrinsically disordered regions

   DK Kumar, F Jonas, T Jana, and 3 more authors

   Molecular Cell, 2023

   Bib

   @article{kumar2023_complementary,
     title = {Complementary strategies for directing in vivo transcription factor binding through DNA binding domains and intrinsically disordered regions},
     author = {Kumar, DK and Jonas, F and Jana, T and Brodsky, S and Carmi, M and Barkai, N},
     journal = {Molecular Cell},
     volume = {83},
     number = {9},
     pages = {1462--1473.e5},
     year = {2023},
   }

2. Cell Syst

   The architecture of binding cooperativity between densely bound transcription factors

   O Lupo, DK Kumar, R Livne, and 3 more authors

   Cell Systems, 2023

   Bib

   @article{lupo2023_cooperativity,
     title = {The architecture of binding cooperativity between densely bound transcription factors},
     author = {Lupo, O and Kumar, DK and Livne, R and Chappleboim, M and Levy, I and Barkai, N},
     journal = {Cell Systems},
     volume = {14},
     number = {9},
     pages = {732--745.e5},
     year = {2023},
   }

2020

1. Mol. Cell

   Intrinsically disordered regions direct transcription factor in vivo binding specificity

   S Brodsky, T Jana, K Mittelman, and 4 more authors

   Molecular Cell, 2020

   Bib

   @article{brodsky2020idr,
     title = {Intrinsically disordered regions direct transcription factor in vivo binding specificity},
     author = {Brodsky, S and Jana, T and Mittelman, K and Chapal, M and Kumar, DK and Carmi, M and Barkai, N},
     journal = {Molecular Cell},
     volume = {79},
     number = {3},
     pages = {459--471.e4},
     year = {2020},
   }